Page updated:
February 4, 2021
Author: Curtis Mobley
View PDF
Publications
Aas, E., 1984. Influence of shape and structure on light scattering by marine particles. Inst. Geophys. Rpt. 53, University of Oslo.
Aas E., 1996. A Refractive index of phytoplankton derived from its metabolite composition. J. Plankton Research 18(12), 2223-2249.
Acharya, P.K., et al., 1998. MODTRAN User’s Manual, Versions 3.7 and 4.0. Air Force Res. Lab., Hanscom AFB, MA., 80 pages.
Ackleson, S. G. and R. W. Spinrad, 1988. Size and refractive index of individual marine particulates: a flow cytometric approach. Appl. Optics 27(7), 1270-1277.
Adler, G., A. A. Riziq, C. Erlick, and Y. Rudich, 2010. Effect of intrinsic organic carbon on the optical properties of fresh diesel soot. Proc. Nat. Acad. Sci 107(15), 6699-6704.
Agrawal, Y. C. and H. C. Pottsmith, 2000. Instruments for particle size and settling velocity observations in sediment transport. Marine Geology 168, 89-114.
Ahmad, Z. and R. S. Fraser, 1982. An iterative radiative transfer code for ocean-atmosphere systems. J. Atmos. Sci. 39, 656-665.
Ahmad, Z., C. R. McClain, J. R. Herman, B. A. Franz, E. J. Kwaitkowska, W. D. Robinson, E. J. Bucsela, and M. Tzortziou, 2007. Atmospheric correction for absorption in retrieving water-leaving reflectances from the SeaWiFS and MODIS measurements. Appl. Optics 39(26), 6504-6512.
Ahmad, Z., B. A. Franz, C. R. McClain, E. J. Kwaitkowska, J. Werdell, E. P. Shettle ,and B. N. Holben, 2010. New aerosol models for the retrieval of aerosol optical thickness and normalizied water-leaving radiances from SeaWifFS and MODIS sensors over coastal regions and open oceans. Appl. Optics, 49(29), 5545-5560. Errata to Table 3 are in Ahmad et al. (2010b).
Ahmad, Z., B. A. Franz, C. R. McClain, E. J. Kwaitkowska, J. Werdell, E. P. Shettle, and B. N. Holben, 2010. New aerosol models for the retrieval of aerosol optical thickness and normalized water-leaving radiances from SeaWiFS and MODIS sensors over coastal regions and open oceans: publisher’s note. Appl. Optics, 50(5), 626.
Ahy, Y.-H., 1999. Proprietes optiques des particules biologiques et minerales presentes dans l’ocean. Application : inversion de la reflectance. Ph.D. Thesis, Univ. Pierre and Marie Curie, Paris, France.
Apfel, R.E., 1972. The tensile strength of liquids. Sci. Am. 227, 58-62, 67-71.
Alves, J. H. G. M. and M. L. Banner, 2003. Revisiting the Pierson-Moskowitz asymptotic limits for fully developed wind waves. J. Phys. Oceanogr., 33, 1301-1323.
Arnott, W. and P.L. Marston, 1988a. Optical glory of small freely rising gas bubbles in water: observed and computed cross-polarized backscattering patterns. J. Opt. Soc. Am. 5, 496-506.
Arnott, W.P. and P.L. Marston, 1988b. Backscattering of laser light from freely rising spherical and spheroidal air bubbles in water. SPIE, 925 Ocean Optics IX, 296-307.
Arnott, W. and P.L. Marston, 1991. Unfolded optical glory of spheroids: backscattering of laser light from freely rising spheroidal air bubbles in water. Appl. Opt. 30 3429-3442.
Arnone, R.A., A.M. Wood, and R.W. Gould Jr., 2004. Water mass classification. Oceanography 17(2), 14-15.
Arons, A.B. and M.B. Peppard, 1969. Concerning an heuristic point of view toward the emission and transformation of light. Am. J. Phys. 33, 367. English translation of Einstein, A. (1905), Ann. Phys. 17, 132.
Artlett, C. P. and H. M. Pask, 2017. New approach to remote sensing of temperature and salinity in natural water samples. Optics Express 25(3), 2840-2851. doi.org/10.1364/OE.25.002840
Asano, S. and M. Sato, 1980. Light scattering by randomly oriented spheroidal particles. Appl. Optics 19(6), 962-974.
Asano, S. and G. Yamamoto, 1975. Light scattering by a spheroidal particle. Appl. Optics 14(1), 29-49.
Austin, R.W. and G. Halikas, 1976. The index of refraction of seawater. SIO Ref. 76-1 Scripps Institution of Oceanography.
Babin, M. 2008. Phytoplankton fluorescence: Theory, current literature and in situ measurement. In M. Babin, C.S. Roesler and J.J. Cullen [eds.], Real-time coastal observing systems for ecosystem dynamics and harmful algal blooms, UNESCO.
Babin, M., A. Morel, V. Fournier-Sicre, F. Fell, and D. Stramski, 2003a. Light scattering properties of marine particles in coastal and open ocean waters as related to the particle mass concentration. Limnol. Oceanogr. 48, 843-859. Available online
Babin, M., D. Stramski, G.M. Ferrari, H. Claustre, A. Bricaud, G. Obolensky, and N. Hoepffner, 2003b. Variations in the light absorption coefficients of phytoplankton, nonalgal particles, and dissolved organic matter in coastal waters around Europe. J. Geophys. Res. 108, 3211. Available online doi.org/10.1029/2001JC000882
Babin, M. and D. Stramski, 2004. Variations in the mass-specific absorption coefficient of mineral particles suspended in water. Limnol. Oceanogr. 49, 756-767. Available online
Bader, H., 1970. The hyperbolic distribution of particle sizes. J. Geophys. Res. 75(15), 2822. DOI/10.1029/JC075i015p02822
Bailey, S.W., B.A. Franz, and P.J. Werdell, 2010. Estimation of near-infrared water-leaving reflectance for satellite ocean color data processing. Optics Exp. 18(7), 7521-7527.
Balch, W.M., K.A. Kilpatrick, P. Holligan, D. Harbour, and E. Fernandez, 1996. The 1991 coccolithophore bloom in the central North Atlantic .1. Relating optics to coccolith concentration. Limnol. Oceanogr. 41(8): 1684-1696.
Baldy, S., 1988. Bubbles in the close vicinity of breaking waves: Statistical characteristics of the generation and dispersion mechanism. J. Geophys. Res. 93, 8239-8248.
Baldy, S. and M. Bourguel, 1985. Measurement of bubbles in a stationary field of breaking waves by a laser-based single-particle scattering technique. J. Geophys. Res. 90, 1037-1047.
Banner, M. L., 1990. Equilibrium spectra of wind waves. J. Phys. Oceanogr., 20, 966-984.
Bartlett, J. S., K. J. Voss, S. Sathyendranath, and A. Vodacek, 1998. Raman scattering by pure water and seawater. Appl. Optics 37(15), 3324-3332.
Beebe, W., 1934. A half mile down. The National Geographic Magazine, LXVI, No. 6, 661-704.
Berg, M. J., C. M. Sorensen, and A. Chakrabarti, 2011. A new explanation of the extinction paradox. J. Quant. Spectros. Rad. Transfer 112, 1170-1181.
Bidigare, R.R., M.E. Ondrusek, J.H. Morrow, and D. Kiefer, 1990. In vivo absorption properties of algal pigments. Ocean Optics X Proc. SPIE, 1302, 290-302.
Binding, C.E. and D.G. Bowers, 2003. Measuring the salinity of the Clyde Sea from space. Estuarine, Coastal Shelf Sci., 57, 605-611.
Binding, C.E., D.G. Bowers and E.G. Mitchelson-Jacob, 2005. Estimating suspended sediment concentrations from ocean colour measurements in moderately turbid waters: The impact of variable particle scattering propoerties. Remote Sensing of Environment, 94, 373-383.
Bishop, J.K.B., 1999. Transmissometer measurement of POC. Deep Sea Res. I, 46, 353-369.
Bishop, J.K.B., S.E. Calvert, and M.Y.S. Soon, 1999. Spatial and temporal variability of POC in the northeast Subarctic Pacific. Deep Sea Res. II, 46, 2699-2733.
Bissett, W.P., K.L. Carder, J.J. Walsh, and D.A. Dieterle, 1999. Carbon cycling in the upper waters of the Sargasso Sea: II. Numerical simulation of the apparent and inherent optical properties. Deep-Sea Res. I 46, 271-317.
Blough, N.V. and R. Del Vecchio, 2002. Chromophoric DOM in the coastal environment. In: D. A. Hansell and C. A. Carlson [eds.], Biogeochemistry of Marine Dissolved Organic Matter, Academic Press, 509-546.
Bodhaine, B. A., N. B. Wood, E. G. Dutton, and J. R. Slusser, 1999. On Rayleigh optical depth calculations. J. Atmos. Oceanic Technol., 16, 1854-1861.
Bohren, C. F. and E. Clothiaux, 2006. Fundamentals of Atmospheric Radiation, Wylie-VCH, 490 pages.
Bohren, C. F. and A. B. Fraser, 1985. The color of the sky. The Physics Teacher, May 1985 edition. 267-272.
Bohren, C.F. and D.R. Huffman, 1983. Absorption and Scattering of Light by Small Particles, John Wiley & Sons.
Boss, E., W.S. Pegau, W.D. Gardner, J.R.V. Zaneveld, A.H. Barnard, M.S. Twardowski, G.C. Chang, and T.D. Dickey, 2001a. Spectral particulate attenuation and particle size distribution in the bottom boundary layer of a continental shelf. J. Geophys. Res. 106, 9509-16. Available online
Boss, E., W.S. Pegau, J.R.V. Zaneveld, and A.H. Barnard, 2001b. Spatial and temporal variability of absorption by dissolved material at a continental shelf. J. Geophys. Res. 106, 9499-507. Available online
Boss, E., M.S. Twardowski, and S. Herring, 2001c. Shape of the particulate beam attenuation spectrum and its inversion to obtain the shape of the particulate size distribution. Appl. Opt. 40, 4885-93. Available online
Boss, E., W.S. Pegau, M. Lee, M. Twardowski, E. Shybanov, G. Korotaev, and F. Baratange, 2004. Particulate backscattering ratio at LEO 15 and its use to study particle composition and distribution. J. Geophys. Res. 109(C1), doi:10.1029/2002JC001415. Available online
Boss, E., W.H. Slade, M. Behrenfeld, and G. Dall’Olmo, 2009a. Acceptance angle effects on the beam attenuation in the ocean. Optics Express 17(3), 1535-1550. Available online
Boss, E., W. Slade, and P. Hill, 2009. Effect of particulate aggregation in aquatic environments on the beam attenuation and its utility for particulate mass. Opt. Express, 17, 9408-9420. Available online
Bowers, D.G. and C.E. Binding, 2006. The optical properties of mineral suspended particles: a review and synthesis. Estuarine, Coastal Shelf Sci., 67, 219-230.
Bowers, D.G. and H.L. Brett, 2008. The relationship between CDOM and salinity in estuaries: an analytical and graphical solution. Journal of Marine Systems, 73, 1-7.
Bowers, D.G., K.M. Braithwaite, W.A.M. Nimmo-Smith, and G.W. Graham, 2010. The optical efficiency of flocs in shelf seas and estuaries. Estuarine, Coastal Shelf Sci., under review.
Bracewell, R. N., 1986. The Fourier Transform and Its Applications, Second Edition, Revised. McGraw Hill, Inc., 474 pages.
Breitz, N. and H. Medwin, 1989. Instrumentation for the acoustical measurement of bubble densities under breaking waves. J. Acoust. Soc. Am. 86, 739-743.
Bricaud, A. and D. Stramski, 1990. Spectral absorption coefficients of living phytoplankton and nonalgal biogenous matter: A comparison between the Peru upwelling area and the Sargasso Sea. Limnol. Oceanogr. 35(3), 562-582.
Bricaud, A., A. Morel, and L. Prieur, 1981. Absorption by dissolved organic matter of the sea (yellow substance) in the UV and visible domains. Limnol. Oceanogr. 26, 43-53.
Bricaud, A., A. Morel, and L. Prieur, 1983. Optical-efficiency factors of some phytoplankters. Limnol. Oceanogr. 28, 816-832.
Bricaud, A., M. Babin, A. Morel, and H. Claustre, 1995. Variability in the chlorophyll-specific absorption coefficients of natural phytoplankton: Analysis and parameterization. J. Geophys. Res 100(C7), 13321-13332.
Bricaud, A., A. Morel, M. Babin, K, Allali, and H. Claustre, 1998. Variation of light absorption by suspended particles with chlorophyll a concentration in oceanic (case 1) waters: Analysis and implications for bio-optical models. J. Geophys. Res 103(C13), 31033-31044.
Bricaud, A., H. Claustre, J. Ras and K. Oubelkheir, 2004. Natural variability of phytoplanktonic absorption in oceanic waters: Influence of the size structure of algal populations. J. Geophys. Res., [Oceans] 109(C11).
Budde, W., 1983. Optical Radiation Measurements, Vol. 4. Physical Detectors of Optical Radiation, Academic Press.
Buiteveld, H, J. H.M. Hakvoort, and M. Donze, 1994. The optical properties of pure water. SPIE Vol. 2258, Ocean Optics XII, 174-183.
Campbell, J. W., 1995. The lognormal distribution as a model for bio-optical variability in the sea. J. Geophys. Res., 100(C7), 13237-13254.
Carder, K.L., R.G. Steward, G.R. Harvey, and P.B. Ortner, 1989. Marine humic and fulvic acids: their effects on remote sensing of ocean chlorophyll. Limnol. Oceanogr. 34, 68-81.
Cartmill, J. and M.-Y. Su, 1993. Bubble size distribution under saltwater and freshwater breaking waves. Dyn. Atmos. Oceans 20, 25-31.
Chami, M., A. Thirouard, and T. Harmel, 2014. POLVSM (Polarized Volume Scattering Meter) instrument: an innovative device to measure the directional and polarized scattering properties of hydrosols. Optics Express 22(21), 26403-26428. DOI:10.1364/OE.22.026403
Chandrasekhar, S., 1960. Radiative Transfer, Dover.
Chang, G.C., T.D. Dickey, E. Boss, C.D. Mobley, and W.S. Pegau, 2003. Toward closure of upwelling radiance in coastal waters. Applied Optics 42(9), 1574-1582.
Chomko, R.M. and H.R. Gordon, 1998. Atmospheric correction of ocean color imagery: use of the Junge power-law aerosol size distribution with variable refractive index to handle aerosol absorption. Appl. Optics 37(24), 5560-5572.
Ciotti, A.M., M.R. Lewis, and J.J. Cullen, 2002. Assessment of the relationships between dominant cell size in natural phytoplankton communities and the spectral shape of the absorption coefficient. Limnol. Oceanogr. 47(2), 404-417.
Clavano, W.R., E. Boss, and L. Karp-Boss, 2007. Inherent optical properties of non-spherical marine-like particles - from theory to observations. Oceanogr. Mar. Biol. Annual Rev. 45, 1-38.
Coble, P. G., 2007. Marne optical biogeochemistry: the chemistry of ocean color. Chem. Rev. 107, 402-418.
Cooley, J. W. and J. W. Tukey, 1965. An algorithm for the machine calculation of complex Fourier series. Math. Comput. 19: 297-301. doi:10.2307/2003354
Cox, C. and W. Munk, 1954. Statistics of the sea surface derived from Sun glitter. Sears Found. J. Marine Research, 13(2), 198-227.
Cox, C. and W. Munk, 1954. Measurement of the roughness of the sea surface from photographs of the Sun’s glitter. J. Opt. Soc. Amer. A, 44(11), 838-850.
Cox, C. and W. Munk, 1955. Some problems in optical oceanography. Sears Found. J. Marine Research, 14(1), 63-78.
Cronin, T. W. and N. Shashar, 2001. The linearly polarized light field in clear, tropical marine waters: spatial and temporal variation of light intensity, degree of polarization and e-vector angle. J. Exp. Biol. 204, 2461-2467.
Crawford, G.B. and D.M. Farmer, 1987. On the spatial distribution of ocean bubbles. J. Geophys. Res. 92, 8231-8243.
Cullen, J.J., 2008. Observation and prediction of harmful algal blooms. In M. Babin, C.S. Roesler and J.J. Cullen [eds.], Real-time coastal observing systems for ecosystem dynamics and harmful algal blooms, UNESCO.
Curtis, D. B., B. Meland, M. Aycibin, N. P. Arnold, V. H. Grassian, M. A. Yound, and P. D. Kleiber, 2008. A laboratory investigation of light scattering from representative components of mineral dust aerosol at a wavelength of 550 nm. J. Geophys. Res. 113, D08210, DOI 10.1029/2007JD009387
Dall’Olmo, G., T.K. Westberry, M.J. Behrenfeld, E. Boss, and W.H. Slade, 2009. Significant contribution of large particles to optical backscattering in the open ocean. Biogeosciences 6, 947-967.
Davis, G.E., 1955. Scattering of light by an air bubble in water. J. Opt. Soc. Am. 45, 572-581.
Davison, B. and J.B. Sykes, 1957. Neutron Transport Theory, Oxford.
Deane, G.B., 1997. Sound generation and air entrainment by breaking waves in the surf zone. J. Acoust. Soc. Am. 192, 2671-2689.
de Boer, J. G., 1969. On the correlation function in time and space of wind-generated ocean waves. Technical report, SACLANT ASW Research Centre, Tech. Rept. No. 160. http://oai.dtic.mil/oai/oai?verb=getRecord&metadataPrefix=html&identifier=AD0865249.
Dekker A.G., S.R. Phinn, J. Anstee, W.P. Bissett, V.E. Brando, B. Casey, P. Fearns, J. Hedley, W. Klonowski, Z.P. Lee, M. Lynch, M. Lyons, C.D. Mobley, and C. Roelfsema, 2011. Inter-comparison of shallow water bathymetry, hydro-optics, and benthos mapping techniques in Australian and Caribbean coastal environments. Limnol. Oceanogr. Methods (in press).
Del Castillo and Miller (2008)
Del Castillo, C.E. and R.L. Miller, 2008. On the use of ocean colour remote sensing to measure the transport of dissolved organic carbon by the Mississippi river plume. Remote Sensing of Environment, 112, 836-844.
Dereniak, E.L. and D.G. Crowe, 1984. Optical Radiation Detectors, John Wyley & Sons.
Desiderio, R.A,. 2000. Application of the Raman Scattering Coefficient of water to calculations in marine optics. Appl. Opt. 39, 1893-1894.
Dierssen, H., R. M. Kudela, J. P. Ryan, and R. C. Zimmerman, 2006. Red and black tides: Quantitative analysis of water?leaving radiance and perceived color for phytoplankton, colored dissolved organic matter, and suspended sediments. Limnol. Oceanogr. 51(6), 2646-2659. doi 10.4319/lo.2006.51.6.2646
Dolin, L. S., 2013. Theory of lidar method for measurement of the modulation transfer function of water types. Appl. Optics 52(2), 199-207.
Doxaran, D., J-M. Froidefond, P. Castaing, and M. Babin, 2009. Dynamics of the turbidity maximum zone in a macrotidal estuary (the Gironde, France): observations from field and MODIS satellite data. Estuarine, Coastal Shelf Sci., 81, 321-332.
Duntley, S. Q., 1954. Measurements of the distribution of water wave slopes. J. Opt. Soc. Amer. 44(7), 574-575.
Duysens, L.M.N., 1956. The flattening effect of the absorption spectra of suspensions as compared to that of solutions. Biochim. biophys. Acta 19, 1-12.
Eckhardt, R., 1987. Stan Ulam, John von Neumann, and the Monte Carlo Method. Los Alamos Science, Special Issue 1987, 131-143. Available online.
Einstein, A., 1910. Theorie der Opaleszenz von homogenen Flüssigkeiten und Flüssigkeitsgemischen in der Nähe des kritischen Zustandes. Ann. Physik 33, 1275-1298.
Eisberg, R. and R. Resnick, 1985. Quantum Physics of Atoms, Molecules, Solids, Nuclei, and Particles; Second Edition, John Wyley & Sons.
Elfouhaily, T., B. Chapron, K. Katsaros, and D. Vandemark, 1997. A unified directional spectrum for long and short wind-driven waves. J. Geophys. Res., 102(C7), 15781-15796.
Falkowski, P. and D. A. Kiefer, 1985. Chlorophyll-a fluorescence in phytoplankton - relationship to photosynthesis and biomass. J. Plankton Res. 7(5), 715-731.
Falkowski, P.G. and T.G. Owens, 1980. Light-shade adaptation - 2 strategies in marine-phytoplankton. Plant Physiol. 66(4): 592-595.
Falkowski, P.G. and J.A. Raven, 2007. Aquatic photosynthesis: 2nd ed. Princeton University Press.
Falkowski, P. G., H. Lin, and M. Y. Gorbunov, 2017. What limits photosynthetic energy conversion efficiency in nature? Lessons from the oceans. Philosoph. Trans. Royal Soc. B. 372. DOI 10.1098/rstb.2016.0376
Fan, Y., W. Li, K. J. Voss, C. K. Gatebe, and K. Stamnes, 2016. Neural network method to correct bidirectional effects in water-leaving radiance. Appl. Optics, 55(1), 10-21.
Feynman, R. P., R. B. Leighton, and M. Sands, 1964. The Feynman Lectures on Physics, vol 2. Addison-Wesley,
Feynman, R. P., 1985. QED. The Strange Story of Light and Matter, Princeton Univ. Press. (Latest edition is 2014)
Finney, D. J., 1944. Dimensions of statistics. J. Royal Stat. Soc. C (Appl. Statistics). 26(3), 285-289. DOI: 10.2307/2346969
Flatau, P.J., J. Piskozub, and J.R.V.Zaneveld, 1999. Asymptotic light field in the presence of a bubble-layer. Opt. Express 5, 120-124.
Flatau, P.J., M. Flatau, J.R.V. Zaneveld, and C.D. Mobley, 2000. Remote sensing of bubble clouds in sea water. Q. J. R. Meteorol. Soc. 126, 2511-2523.
Fleisch, D., 2008. A Student’s Guide to Maxwell’s Equations, Cambridge Univ. Press. Available online.
Flory, E.N., P.S. Hill, T.G. Milligan, and J. Grant, 2004. The relation between floc area and backscattering during a spring bloom. Deep-Sea Res., 51, 213-223.
Fournier, G. and J.L. Forand, 1994. Analytic phase function for ocean water. In Ocean Optics XII SPIE Vol. 2258, J. S. Jaffe [ed], 194-201.
Fournier, G. and M. Jonasz, 1999. Computer based underwater imaging analysis. In Airborne and In-water Underwater Imaging, SPIE Vol. 3761, G. Gilbert [ed], 62-77 (with corrections).
Fox, F.E. and K. Herzfeld, 1954. Gas bubbles with organic skin as cavitation nuclei. J. Acoust. Soc. Am. 26, 984-989.
Franz, B, S. W. Bailey, P. J. Werdell, and C. R. McClain, 2007. Sensor-independent approach to the vicarious calibration of satellite ocean color radiometry. Appl. Optics 46(22), 5068-5082.
Franz, B. 2015. Atmospheric Correction Discussion: Where we are today and where we might be in 2.5 years. Presentation at the PACE Science Team Meeting; Jan 2014. Available at Available online.,
Frouin, R., M. Schwindling, and P. Y. Dechamps, 1996. Spectral reflectance of sea foam in the visible and near infrared: In situ measurements and remote sensing implications. J. Geophys. Res., 101(C6), 14361-14371.
Fujii, M., E. Boss, and F. Chai, 2007. The value of adding optics to ecosystem models: a case study. Biogeosciences Discuss. 4, 1585-1631. Available online.
Gao B.-C. and A. F. H. Goetz, 1990. Column atmospheric water vapor and vegetation liquid water retrievals from airborne imaging spectrometer data. J. Geophys Res. 95(D4), 3549-3564.
Gao, B.-C., M.J. Montes, Z. Ahmad, and C.O. Davis, 2000. Atmospheric correction algorithm for hyperspectral remote sensing of ocean color from space. Appl. Opt. 39(6), 887-896.
Garcia., R. D. M., 2012. Fresnel boundary and interface conditions for polarized radiative transfer in a multilayer medium. J. Quant. Spectros. Rad. Trans., 113, 306-307.
Ge, Y., H.R. Gordon, and K.J. Voss, 1993. Simulation of inelastic-scattering contributions to the irradiance field in the ocean: variation in Fraunhofer line depths. Appl. Opt. 32, 4028-4036.
Gershun, A.A., 1936. Fundamental ideas of the theory of a light field (vector methods of photometric calculations), in Russian. Izvestiya Akad. Nauk SSSR, 417-430.
Gershun, A.A., 1939. The light field. J. Math. and Phys. 18(2), 51-151.
Goodman, J. W., 1996. Introduction to Fourier Optics, Second Edition. McGraw-Hill.
Gordon, H.R., 1973. Simple calculation of the diffuse reflectance of the ocean. Appl. Optics 12(12), 2803-2804.
Gordon, H.R., 1978. Removal of atmospheric effects from satellite imagery of the oceans. Appl. Optics 17(10), 1631-1636.
Gordon, H. R., 1979. Diffuse reflectance of the ocean: The theory of its augmentation by chlorophyll a fluorescence at 685 nm. Appl. Optics 18(8), 1161-1166.
Gordon, H.R., 1987. Bio-optical model describing the distribution of irradiance at the sea surface resulting from a point source imbedded in the ocean Appl. Optics 26(19), 4133-4148.
Gordon, H.R. 1989. Can the Lambert-Beer law be applied to the diffuse attenuation coefficient of ocean water? Limnol. Oceanogr. 34(8), 1389-1409.
Gordon, H.R., 1994. Modeling and simulating radiative transfer in the ocean. Chapter 1 in Ocean Optics, R.W. Spinrad, K.L. Carder and M.J. Perry [eds], Oxford.
Gordon, H.R., 1994. Equivalence of the point and beam spread function of scattering media: a formal demonstration. Appl. Optics 33(6), 1120-1122.
Gordon, H. R., 1995. Remote sensing of ocean color: a methodology for dealing with broad spectral bands and significant out-of-band response. Appl. Optics, 34(36), 8363-8374.
Gordon, H.R., 1997. Atmospheric correction of ocean color imagery in the Earth observing system era. J. Geophys. Res. 102D, 17081-17106.
Gordon, H.R., 2005. Normalized water-leaving radiance: revisiting the influence of surface roughness, Appl. Optics 44(2), 241-248.
Gordon, H.R., 2006. Backscattering of light from disklike particles: is fine-scale structure or gross morphology more important? Appl. Optics 45, 7166-7173.
Gordon, H.R., 2007. Rayleigh-Gans scattering approximation: surprisingly useful for understanding backscattering from disk-like particles. Optics Express 15 (9), 5572-5588.
Gordon, H. R., 2019. Physical Principles of Ocean Color Remote Sensing. IOCCG Download
Gordon, H. R. and D. K. Clark, 1981. Clear water radiances for atmospheric correction of Coastal Zone Color Scanner imagery. Appl. Optics 20, 4175-4780.
Gordon, H.R. and T. Du, 2001. Light scattering by nonspherical particles: Application to coccoliths detached from Emiliania huxleyi. Limnol. Oceanogr. 46, 1438-1454.
Gordon, H. R. and B. Franz, 2008. Remote sensing of ocean color: Assessment of the water-leaving radiance bidirrectional effects on the atmospheric diffuse transmittance for SeaWiFS and MODIS intercomparisons. Rem. Sens. Environ., 112, 2677-2685.
Gordon, H.R. and A. Morel, 1983. Remote Assessment of Ocean Color for Interpretation of Satellite Visible Imagery: A Review. Lecture Notes on Coastal and Estuarine Studies, vol. 4, Springer-Verlag.
Gordon, H. R. and K. J. Voss, 2004. MODIS Normalized Water-leaving Radiance. MODIS Algorithm Theoretical Basis Document, Version 5, NASA, 121 pages.
Gordon, H. R. and M. Wang, 1992. Surface-roughness considerations for atmospheric correction of ocean color sensors. I: the Rayleigh-scattering component. Appl. Optics, 31(21), 4247-4260.
Gordon, H.R. and M. Wang, 1994. Retrieval of water-leaving radiance and aerosol optical thickness over the oceans with SeaWiFS: a preliminary algorithm. Appl. Opt. 33, 443-452.
Gordon, H.R. and M. Wang, 1994. Influence of oceanic whitecaps on atmospheric correction of ocean-color sensor. Appl. Opt. 33(33), 7754-7763.
Gordon, H.R., O. B. Brown, and M. M. Jacobs, 1975. Computed relationships between the inherent and apparent optical properties of a flat homogeneous ocean. Appl. Optics 14(2), 417-427.
Gordon, H. R, O. B. Brown, R. H. Evans, J. W. Brown, R. C. Smith, K. S. Baker, and D. K. Clark, 1988. A semianalytical radiance model of ocean color. J. Geophys. Res. 93(D9), 10909-10924.
Gordon, H. R., T. Du, and T. Zhang, 1997. Atmospheric correction of ocean color sensors: analysis of the effects of residual instrument polarization sensitivity. Appl. Optics 36(27), 6938-6948.
Gordon, H. R., T. Du, and T. Zhang, 1997. Remote sensing of ocean color and aerosol properties: resolving the issue of aerosol absorption. Appl. Optics 36(33), 8670-8684.
Gordon, H.R., M.R. Lewis, S.D. McLean, M.S. Twardowski, S.A. Freeman, K.J. Voss, and G.C. Boynton. 2009. Spectra of particulate backscattering in natural waters. Opt. Express 17(18), 16192-16208.
Gray, D. J., 2012. Order-of-scattering point spread function and modulation transfer functions for natural waters. Appl. Optics 51(28), 6753-6764.
Gregg, W. and K.L. Carder, 1990. A simple solar irradiance model for cloudless maritime atmospheres. Limnol. Oceanogr. 38(5), 1657-1675.
Greenler, R., 2020. Rainbows, Halos and Glories. SPIE Press vol. PM321, ISBN: 9781510638372. (Republication of the original 1980 edition).
Griffiths, D.J., 1981. Introduction to Electrodynamics, Prentice-Hall.
Griffiths, D.J., 2008. Introduction to Elementary Particles, Second Editiion, Wyley.
Haines, M.A. and B.D. Johnson, 1995. Injected bubble populations in seawater and fresh water measured by a photographic method. J. Geophys. Res. 100, 7057-7068.
Halliday, D. and R. Resnick. 1988. Fundamentals of Physics, Third Edition, John Wiley & Sons.
Handbook of Optics, Volume 1: Fundamentals, Techniques, and Design. 1995. M. Bass [ed.], McGraw-Hill.
Hansen, J. E. 1971. Multiple scattering of polarized light in planetary atmospheres. Part II. Sunlight reflected by terrestrial water clouds. J. Atmos. Sci. 28, 1400-1426.
Hansen, J. E. and L. D. Travis, 1974. Light scattering in planetary atmospheres. Space Sci. Rev. 16, 527-610.
Hapke, B., 1993. Theory of Reflectance and Emittance Spectroscopy, Cambridge Univ. Press.
Harmel, T., M. Hieronymi, W. Slade, R. Röttgers, F. Roullier, and M. Chami, 2016. Laboratory experiments for inter-comparison of three volume scattering meters to measure angular scattering properties of hydrosols. Optics Express 24(2), A234-A256. doi:10.1364/OE.24.00A234
Harvey, A. H., J. S. Gallagher, and J. M. H. Levelt Sengers, 1998. Revised formulation of the refractive index of water and steam as a function of wavelength, temperature and density. J. Phys. Chem. Ref. Data 27, 761-774. doi.org/10.1063/1.556029
Hawes, S. K., 1992. Quantum Fluorescence Efficiencies of Marine Fulvic and Humic Acids. Masters Thesis, Univ. South Florida, 92 pages. download pdf
Hawes, S. K., K. L. Carder, and G. R. Harvey, 1992. Quantum fluorescence efficiencies of fulvic and humic acids: effects on ocean color and fluorometric detection. In Ocean Optics XI, Proc. SPIE vol. 1750, 212-223.
Hecht, E., 1989. Optics, Second Edition, Addison-Wesley.
Henyey, L.C. and J.L. Greenstein. 1941. Diffuse radiation in the galaxy. Astrophys. J. 93, 70-83.
Heron, M. L., 2006. Short-wave ocean wave slope models for use in remote sensing data analysis. IEEE Transactions Geosci. Rem. Sens., 44(7), 1962-1973.
Herring, S.G., 2002. A systematic survey of the modeled optical properties of nonspherical marine-like particles. MS thesis, Oregon State Univ.
Hochberg, E., C.D. Mobley, Y. Park, J. Goodman, K.R. Turpie, B-C Gao, C.F. Bruce, R.O. Green, R.G. Knox, F.E. Muller-Karger, E.M. Middleton, P.J. Minnet, C. Gentemann, B.V. Oaida, and R.C. Zimmerman, 2010. Summary of HyspIRI Sunglint Subgroup Discussions and Analyses Fall 2009 - Spring 2010. Draft Report dated 23 June 2010.
Hjerslev (1975) Højerslev, N. 1975. A spectral light absorption meter for measurements in the sea. Limnol. Oceanogr. 20(6), 1027-1034.
Hjerslev and Zaneveld (1977) Højerslev, N. and J.R.V. Zaneveld. 1977. A theoretical proof of the existence of the submarine asymtotic daylight field. Rept. No. 34, Københavns Univ. Inst. Fysisk Oceanog., Copenhagen.
Hoge, F.E. C.W. Wright, W.B. Krabill, R.R. Buntzen, G.D. Gilbert, R.N. Swift, J.K. Yungel, and R.E. Berry. 1988. Airborne lidar detection of subsurface oceanic scattering layers. Appl. Opt. 27, 3969-3977.
Holl, J.W., 1970. Nuclei and Cavitation. J. Basic Eng. 92, 681-688.
Hoepffner and Sathyendranath (1991)
Hoepffner, N. and Sathyendranath. S., 1991. Effect of pigment composition on absorption properties of phytoplankton. Mar. Ecol.: Prog. Ser., 73(1), 11-23.
Holthuijsen, L. H., 2007. Waves in Oceanic and Coastal Waters. Cambridge Univ. Press.
Horoshenkov, K. V., A. Nichols, S. J. Tait, and G. A. Maximov, 2013. The pattern of surface waves in a shallow free surface flow. J. Geophys. Res. Earth Surf., 118, 1864–1876.
Hou, W., Z.-P. Lee, and A. W. Weidemann, 2007. Why does the Secchi disk disappear? An imaging perspective. Optics Express 15(6), 2791-2802.
Hou, W., D. J. Gray, A. D. Weidemann, and R. A. Arnone, 2008. Comparison and validation of point spread models for imaging in natural waters. Optics Express, 16(13), 9958-9965.
Hu, Y.-X., D. Winker, P. Yang, B. Baum, L. Poole, and L. Vann, 2001. Identification of cloud phase from PICASSO-CENA lidar depolarization: a multiple scattering sensitivity study. J. Quant. Spectros. Rad. Trans., 70, 569-579.
Huang, P. A., D. W. Wang, E. J. Walsh, W. B. Krabill, and R. N. Swift, 2000. Airborne measurements of the wavenumber spectra of ocean surface waves. Part II: Directional distribution. J. Phys. Oceanogr., 30, 2768-2787.
Huffman, T.B. and D.L. Zveare, 1974. Sound Speed Dispersion, Attenuation and Inferred Microbubbles in the Upper Ocean. M.S. thesis, p. 119, Naval Postgraduate School.
Huot, Y., C.A. Brown, and J.J. Cullen, 2005. New algorithms for MODIS sun-induced chlorophyll fluorescence and a comparison with present data products. Limnol. Oceanogr.: Methods 3, 108-130.
HydroLight Technical Documentation (2019)
Hedley, J. D. and C. D. Mobley, 2019. HydroLight 6.0 - EcoLight 6.0 Technical Documentation (2019), Numerical Optics Ltd. Download pdf
HydroLight Users’ Guide (2019)
Hedley, J. D. and Mobley, 2019. HydroLight 6.0 - EcoLight 6.0 Users’ Guide (2019), Numerical Optics Ltd. Download pdf
Preisendorfer, R.W., 1976. Hydrologic Optics, in 6 volumes: Vol. 1: Introduction, 218 pp; Vol. 2: Foundations, 400 pp; Vol. 3: Solutions, 246 pp; Vol. 4: Imbeddings, 207 pp; Vol. 5: Properties, 296 pp; Vol. 6: Surfaces. NOAA Pacific Mar. Environ. Lab., Seattle, WA. (Out of print, but available on CD from Curtis Mobley)
Platt, T., N. Hoepffner, V. Stuart, and C. Brown [eds], 2008. IOCCG Report Number 7: Why Ocean Colour? The Societal Benefits of Ocean-Colour Technology. Available online
Wang, M. [editor], 2010. IOCCG Report Number 10. Atmospheric Correction for Remotely-Sensed Ocean-Color Products. IOCCG Report Series, 78 pages. Available online
Iturriaga, R. and D. A. Siegel, 1989. Microphotometric characterization of phytoplankton and detrital absorption properties in the Sargasso Sea. Limnol. Oceanogr. 34(8),1706-1726.
Jackson, J. D., 1962. Classical Electrodynamics. John Wiley & Sons.
Jackson, J. D., 1975. Classical Electrodynamics, Second Edition. John Wiley & Sons. Available online
Jeffrey, S.W., R.F.C. Mantoura, and W.W. Wright [eds], 1997. Phytoplankton pigments in oceanography: Guidelines to modern methods (monographs on oceanographic methodology). UNESCO.
Jeffrey, S.W. and M. Vesk, 1997. Introduction to marine phytoplankton and their pigment signatures, p. 37-84. In: S.W. Jeffrey, R.F.C. Mantoura, and W.W. Wright [eds]. Phytoplankton pigments in oceanography: Guidelines to modern methods (monographs on oceanographic methodology). UNESCO.
Jerlov, N.G., 1968. Optical Oceanography, Elsevier Oceanography Series 5.
Jerlov, N.G., 1976. Marine Optics, Elsevier Oceanography Series 14.
Jerlov, N.G. and K. Nygard, 1969. A quanta and energy meter for photosynthetic studies. Copenhagen Univ. Inst. Fysisk Oceanog., Rept 10.
Johnson, B.D., 1986. Bubble populations: Background and breaking waves, p. 69-73. In E.C. Monahan and G. Mac Niocail [eds.], Oceanic Whitecaps and their role in air-sea exchange processes, D. Reidel.
Johnson, B.D. and R.C. Cooke, 1979. Bubble populations and spectra in coastal waters: A photographic approach. J. Geophys. Res. 84, 3761-3766.
Johnson, B.D. and R.C. Cooke, 1981. Generation of stabilized microbubbles in seawater. Sci. 213, 209-211.
Johnsen, G., N.B. Nelson, R.V.M. Jovine, and B.B. Prezelin, 1994. Chromoprotein-dependent and pigment-dependent modeling of spectral light-absorption in 2 dinoflagellates, prorocentrum-minimum and heterocapsa-pygmaea. Mar. Ecol.: Prog. Ser. 114(3), 245-258. Jonasz (1983)
Jonasz, M. 1983. Particle-size distributions in the Baltic. Tellus 35B, 346-358.
Jonasz, M. 1987, Nonsphericity of suspended marine particles and its influence on light scattering. Limnol. Oceanogr. 32, 1059-1065.
Jonasz, M. and G.R. Fournier, 2007. Light scattering by particles in water: Theoretical and experimental foundations. Academic Press.
Junge, C., 1953. Die Rolle der Aerosole und der gasförmigen Beimengungen der Luft im Spurenstoffhaushalt der Troposphäre. Tellus, 5(1), 1-26. DOI: 10.3402/tellusa.v5i1.8567
Junge, C., 1955. The size distribution and aging of natural aerosols as determined from electrical and optical data on the atmosphere. J. Meteorology 12, 13-25.
Kattawar, G.W, 1975. A three-parameter analytic phase function for multiple scattering calculations. J. Quant. Spectrosc. Radiat. Trans. 15, 839-849.
Kattawar, G.W., 1994. Polarization of light in the ocean. In R.W. Spinrad, K.L. Carder, and M.J. Perry, editors, Ocean Optics, pages 200-225. Oxford Press.
Kattawar, G.W. and C.N. Adams, 1989. Stokes vector calculations of the submarine light field in an atmosphere-ocean with scattering according to a Reyleigh phase matrix: Effect of interface refractive index on radiance and polarization. Limnol. Oceanogr. 34(8), 1453-1472.
Kattawar, G.W. and G.N. Plass, 1976. Asymptotic radiance and polarization in optically thick media: ocean and clouds. Appl. Optics 15(12), 3166-3178.
Kattawar, G. W. and X. Xu, 1992. Filling in of Fraunhofer lines in the ocean by Raman scattering. Appl. Optics 31(30), 6491-6500.
Kay, S., J. Hedley, S. Lavender, and A. Nimmo-Smith, 2011. Light transfer at the ocean surface modeled using high resolution sea surface realizations. Optics Express 19, 6493-6505.
Kelly, K. L., 1943. Color designations for lights. J. Opt. Soc. Amer. 33(11), 627-632.
Kiefer, D. A. and R. A. Reynolds, 1992. Advances in understanding phytoplankton fluorescence and photosynthesis. In Primary Productivity and Biogeochemical Cycles in the Sea, Edited by P. G. Falkowski and A. D. Woodhead, Plenum Press, New York. 155-174.
Kingsbury, D.L. and P.L. Marston, 1981. Mie scattering near the critical angle of bubbles in water. J. Opt. Soc. Am. 71, 358-361.
Kirk, J.T.O., 1976. A theoretical analysis of the contribution of algal cells to the attenuation of light within natural waters, III. Cylindrical and spheroidal cells. New Phytol. 77, 341-358.
Kirk, J.T.O., 1994. Light and Photosynthesis in Aquatic Ecosystems, Second Edition, Cambridge Univ. Press.
Kirkpatrick, G.J., D.F. Millie, M.A. Moline, and O. Schofield, 2000. Optical discrimination of a phytoplankton species in natural mixed populations. Limnol. Oceanogr. 45(2), 467-471.
Kishino, M.; Takahashi, M.; Okami, N.; Ichimura, S., 1985. Estimation of the spectral absorption coefficients of phytoplankton in the sea. Bulletin of Marine Sci. 37(2), 634-642.
Koepke, P., 1984. Effective reflectance of oceanic whitecaps. Appl. Optics 23(11), 1816-1824.
Kokhanovsky, A. A. and E. P. Zege, 1997. Optical properties of aerosol particles: a review of approximate analytical solutions. J. Aerosol. Sci. 28(1), 1-21.
Kolovayev, D.A., 1976. Investigation of the concentration and statistical size distribution of wind-produced bubbles in the near-surface ocean. Oceanology (Engl. Transl.) 15, 659-661.
Kutser, T., D.C. Pierson, K.Y. Kallio, A. Reinart, and S. Sobek, 2005. Mapping lake CDOM by satellite remote sensing. Remote Sensing of Environment, 94, 535-540.
Lamarre, E. and W.K. Melville, 1991. Air entrainment and dissipation in breaking waves. Nature 351, 469-472.
Larsen, J. C., 1973. An introduction to electromagnetic induction in the ocean. Phys. Earth Planetary Interiors 7, 389-398.
Larsen, J. C., 1992. Transport and Heat Flux of the Florida Current at 27 degrees N Derived from Cross-Stream Voltages and Profiling Data: Theory and Observations. Philo. Trans. Royal Soc. London A 339(1650), 169-236. DOI: 10.1098/rsta.1992.0007
Latta, G. E. and J. A. Bailie, 1968. On the autocorrelation functions of wind generated ocean waves. Zeit. Angew. Math. Phys., 19, 575–586.
Lawaetz, A. J. and C. A. Stedmon, 2009. Fluorescence intensity calibration using the Raman scatter peak of water. Appl. Spectros. 63(8), 936-940.
Leathers, R.A., T.V. Downes, and C.D. Mobley, 2004. Self-shading correction for oceanographic upwelling radiometers. Opt. Express 12(20), 4709-4718. Download pdf
Leathers, R.A., T.V. Downes, C.O. Davis, and C.D. Mobley, 2004. Monte Carlo Radiative Transfer Simulations for Ocean Optics: A Practical Guide. Naval Research Lab. Rept. NRL/MR/5660-04-8819. Download pdf
Lee, M.E. and M.R. Lewis, 2003. A new method for the measurement of the optical volume scattering function in the upper ocean. J. Atmos. Ocean. Technol. 20, 563-571.
Lee, Z.-P., K. L. Carder, S. K. Hawes, R. G. Steward, T. G. Peacock, and C. O. Davis, 1994. Model for the interpretation of hyperspectral remote-sensing reflectance. Appl. Optics 33(24), 5721-5732.
Lee, Z. P., Y.-H. Ahn, C. D. Mobley, and R. Arnone, 2010. Removal of surface-reflected light for the measurement of remote-sensing reflectance from an above-surface platform. Optics Express, 18(25), 26313-26324.
Lee, Z. P., R. A. Arnone, C.-M. Hu, P. J. Werdell, and B. Lubac. 2010. Uncertainties of optical parameters and their propagations in an analytical ocean color inversion algorithm. Appl. Optics 49(3), 369381.
Lee, Z. P., K. Du, K. J. Voss, G. Zibordi, B. Lubac, R. Arnone, and A. Weidemann, 2011. An inherent-optical-property-centered approach to correct the angular effects in water-leaving radiance. Appl. Optics 50(19), 3155-3167.
Lee, Z. P., S. Shang, C. Hu, K. Du, A. Weidemann, W. Hou, J. Lin, and G. Lin, 2015. Secchi disk depth: A new theory and mechanistic model for underwater visibility. Rem. Sens. Environ. 169, 139-149.
Leeuw, G.D. and L.H. Cohen, 1995. Bubble size distribution in coastal seas. In B. Jahne and E.C. Monahan [eds.], Air-water gas transfer. AEON Verlag and Studio.
Leighton, R.B., 1959. Principles of Modern Physics, McGraw-Hill.
Lenoble, J., 1993. Atmospheric Radiative Transfer, A. Deepak.
Li, C., W. Cao, J. Yu, T. Ke, G. Lu, Y. Yang, and C. Guo, 2012. An instrument for in situ measuring of the volume scattering function of water: design, calibration and primary experiments. Sensors 12, 4514-4533. doi:10.3390/s120404514
Liboff, R.L., 1980. Introductory Quantum Mechanics, Addison-Wesley.
Mobley, C.D., 1994. Light and Water: Radiative Transfer in Natural Waters, Academic Press. (Out of print, but can be obtained on CD from Curtis Mobley or download Light and Water as a zipped pdf (22.4 Mbytes).) Liley (1992)
Liley, J. B., 1992. Fitting size distributions to optical particle counter data. Aerosol Sci. Tech. 17(2), 84-92. DOI:10.1080/02786829208959562https://doi.org/10.1080/02786829208959562
Lilienfeld, P., 1991. Gustav Mie: the person. Appl. Optics 30(33), 4696-4698.
Ling, S.C. and H.P. Pao, 1988. Study of micro-bubbles in the North Sea, p. 197-210. In B.R. Kerman [ed.], Sea surface sound. Kluwer Academic Publishers.
Loisel, H. and A. Morel, 1998. Light scattering and chlorophyll concentration in case 1 waters: A reexamination. Limnol. Oceanogr. 43(5), 847-858.
Longuet-Higgins, M. S., D. E. Cartwright, and N. D. Smith, 1963. Observations of the directional spectrum of sea waves using the motions of a flotation buoy. In Ocean Wave Spectra, 111-136. Prentice-Hall.
Lotsberg, J.K., E. Marken, J.J. Stamnes, S.R. Erga, K. Aursland, and C. Olseng, 2007. Laboratory measurements of light scattering from marine particles. Limnol. Oceanogr.: Methods 5, 34-40.
Maffione, R.A. and R.C. Honey, 1992. Instrument for measuring the volume scattering function in the backward direction. Proc. SPIE 1750, Ocean Optics XI; doi:10.1117/12.140650.
Maffione, R.A., K.J. Voss, and R.C. Honey, 1993. Measurement of the spectral absorption coefficient in the ocean with an isotropic light source. Appl. Optics 32(18), 3273-3279.
MacCallum, I., A. Cunningham, and D. McKee, 2004. The measurement and modelling of light scattering by phytoplankton cells at narrow forward angles. J. Opt. A: Pure Appl. Opt. 6, 698-702.
Makhoul, J., 1980. A fast cosine transform in one and two dimensions. IEEE Trans. Acoustics, Speech, Signal Process. 28(1), 27-34.
Maritorena, S., A. Morel, and B. Gentili, 2000. Determination of the fjoorescence quantum yield by oceanic phytoplankton in their natural habitat. Appl. Optics 39(36), 6725-6737.
Marshall, B. R. and R. C. Smith, 1990. Raman scattering and in-water ocean optical properties. Appl. Optics 29, 71-84.
Marston, P.L., 1979. Critical angle scattering by a bubble: physical-optics approximation and observations. J. Opt. Soc. Am. 69, 1205-1211.
Marston, P.L., B. Billette, and C. Dean, 1988. Scattering of light by a coated bubble in water near the critical and Brewster scattering angles. SPIE 925 Ocean Optics IX, 925, 308-316.
Marston, P.L. and D.L. Kingsbury, 1981. Scattering by a bubble in water near the critical angle: Interference effects. J. Opt. Soc. Am. 71, 192-196.
Marston, P.L., D.S. Langley, and D.L. Kingsbury, 1982. Light scattering by bubbles in liquids: Mie theory, physical-optics approximations and experiments. J. Appl. Sci. Res. 38, 373-383.
Massel, S. R., 2011. On the geometry of ocean surface waves. Oceanologia, 53(2), 521-548.
Masters, B. R., 2009. Lord Rayleigh: A Scientific Life, Optics and Photonics June 2009. Available online
Matta, C. F, L. Massa, A. V. Gubskaya, and E. Knoll, 2011. Can one take the logarithm or the sine of a dimensioned quantity or a unit? Dimensional analysis involving transcendental functions. J. Chem. Educ. 88(1), 6770. DOI: 10.1021/ed1000476
McClain, C. R., E. J. Ainsworth, R. A. Barnes. R. E. Splee, Jr., R. S. Patt, W. D. Robinson, M. Wang ,and S. W. Bailey, 2000. Volume 9, SeaWiFS Postlaunch Calibration and Validation Analyses, Part 1, SeaWiFS Postlaunch Technical Report Series, S. B. Hooker and E. R. Firestone [editors], NASA, 83 pages.
McClain, C. R., E. J. Ainsworth, R. A. Barnes, R. E. Splee, Jr., F. S. Patt, W. D. Robinson, M. Wang, and S. W. Bailey, 2000. Volume 10, SeaWiFS Postlaunch Calibration and Validation Analyses, Part 2, SeaWiFS Postlaunch Technical Report Series, S. B. Hooker and E. R. Firestone [editors], NASA, 57 pages.
McLean, J. W., J. D. Freeman, and R. E. Walker, 2008. Beam spread function with time dispersion. Appl. Optics, 37(21), 4701-4711.
McLean, J. W. and K. J. Voss, 1991. Point spread function in ocean water: comparison between theory and experiment. Appl. Optics 30(15), 2027-2030.
Meister, G., E. J. Kwiatkowska, B. A. Franz, F. S. Patt, G. C. Feldman, and C. R. McClain, 2005. Moderate-resolution imaging spectroradiometer ocean color polarization correction. Appl. Optics 44(26), 5524-5535.
Measures, R.M. 1992. Laser Remote Sensing: Fundamentals and Applications, Krieger.
Medwin, H., 1970. In situ acoustic measurements of bubble populations in coastal ocean waters. J. Geophys. Res. 75.
Medwin, H., 1977. In situ acoustic measurements of microbubbles at sea. J. Geophys. Res. 82, 971-976.
Mertens, L. E. and R. S. Replogle, 1977. Use of point spread and beam spread functions for analysis of imaging systems in water. J. Opt. Soc. Amer. 67(8), 1105-1117.
Metropolis, N. and S. Ulam, 1949. The Monte Carlo method. J. Amer. Statistical Assoc. 44(247), 335-341.
Meyer-Arendt, J.R., 1968. Radiomenter and photometery: units and conversion factors. Appl. Optics 7, 2081-2084.
Mie G., 1908. Beiträge zur Optik trüber Medien, speziell kolloidaler Metallösungen. Ann. Physik, Vierte Folge, Band 25(3), 377-445.
Mishchenko, M.I., L.D. Travis and A.A. Lacis, 2002. Scattering, Absorption, and Emission of Light by Small Particles, Cambridge Univ. Press. Available online
Mishchenko, M.I., 2008. Multiple scattering by particles embedded in an absorbing medium. 2. Radiative transfer equation. J. Quant. Spectros. Rad. Trans. 108, 2386-2390.
Mishchenko, M.I., 2008. Multiple scattering, radiative transfer, and weak localization in discrete random media: unified microphysical approach. Rev. Geophys., 46, 1-33.
Mishchenko, M.I., 2013. 125 years of radiative transfer: Enduring triumphs and persisting misconceptions. In Radiation Processes in the Atmosphere and Ocean. AIP Conf. Proc. 1531, 11-18. doi 10.1063/1.4804696.
Mishchenko, M.I., 2014. Directional radiometry and radiative transfer: The convoluted path from centuries-old phenomenology to physical optics. J. Quant. Spectros. Rad. Trans. 146, 4-33.
Mishchenko, M.I., J. M. Dlugach, M. A. Yurkin, L. Bi, B. Cairns, L. Liu, R. L. Panetta, L. D. Travis, P. Yang, and N. T. Zakharova, 2016. First principles modeling of electromagnetic scattering by discrete and discretely heterogeneous random media. Physics Reports 632, 1-75. doi 10.1016/j.physrep.2016.04.002.
Mobley, C.D., 1989. A numerical model for the computation of radiance distributions in natural waters with wind-roughened surfaces. Limnol. Oceanogr. 34(8), 1473-1483.
Mobley, C.D., 1994. Light and Water: Radiative Transfer in Natural Waters, Academic Press. (Out of print, but can be obtained on CD from Curtis Mobley or download Light and Water as a zipped pdf (22.4 Mbytes).).
Mobley, C.D., 1996. Monte Carlo simulation of a point light source in an infinite medium. SRI Tech Report, May 1996, 39 pages.
Mobley, C.D., 1999. Estimation of the remote-sensing reflectance from above-surface measurements. Appl. Optics 38(36), 7442-7455.
Mobley, C.D., 2011. Fast light calculations for ocean ecosystem and inverse models. Optics Express 19(20), 18927-18944.
Mobley, C. D., 2014. HydroPol Mathematical Documentation: Invariant Imbedding Theory for the Vector Radiative Transfer Equation. Sequoia Scientific, Inc. Bellevue, WA 98005. 163 pages. Download pdf
Mobley, C.D., 2015. Polarized reflectance and transmittance properties of wind-blown sea surfaces. Appl. Optics 54(15), 4828-4849.
Mobley, C. D., 2016. Modeling Sea Surfaces: A Tutorial on Fourier Transform Methods. Version 2.0. Sequoia Scientific, Inc. Bellevue, WA 98005. 104 pages. Download pdf
Mobley, C. D., 2018. Monte Carlo Ray Tracing for Coral Reef Light Simulations. Sequoia Scientific, Inc. Bellevue, WA 98005. 3 pages. Download pdf
Mobley, C. D., 2019. The Evolution of Radiative Transfer Theory (draft of 02 March 2019). Download pdf
Mobley, C. D., 2020. A Tutorial on Prediction of Underwater Images. Draft technical report, available from the author. 47 pages.
Mobley, C. D. and E. Boss, 2012. Improved irradiances for use in ocean heating, primary production, and photo-oxydation calculations, Applied Optics, 51(27), 6549-6560.
Mobley, C.D., B. Gentili, H.R. Gordon, Z. Jin, G.W. Kattawar, A. Morel, P. Reinersman, K. Stamnes, and R. Stavn, 1993. Comparison of numerical models for the computation of underwater light fields. Applied Optics 32(36), 7484-7504.
Mobley, C.D., L.K. Sundman, and E. Boss, 2002. Phase function effects on oceanic light fields. Appl. Optics 41(6), 1035-1050.
Mobley, C.D., H. Zhang, and K.J. Voss, 2003. Effects of optically shallow bottoms on upwelling radiances: Bidirectional reflectance distribution function effects. Limnol. Oceanogr. 48(1, part 2), 337-345.
Mobley, C.D., D. Stramski, W. P. Bisset, and E. Boss, 2004. Optical modeling of ocean waters: Is the case-1 case-2 still useful? Oceanography 17(2), 60-67.
Mobley, C.D., L.K. Sundman, C.O. Davis, J.H. Bowles, T.V. Downes, R.A. Leathers, M.J. Montes, W.P. Bissett, D.D.R. Kohler, R.P. Reid, E.M. Louchard, and A. Gleason, 2005. Interpretation of hyperspectral remote-sensing imagery by spectrum matching and look-up-tables. Appl. Optics 44(17), 3576-3592.
Mobley, C. D., F. Chai, P. Xiu, and L. K. Sundman, 2015. Impact of improved light calculations on predicted phytoplankton growth and heating in an idealized upwellingdownwelling channel geometry. J. Geophys. Res. Oceans, 120, doi:10.1002/2014JC010588.
Mobley, C. D., P. J. Werdell, B. Franz, Z. Ahmad, and S. Bailey, 2016. Atmospheric Correction for Satellite Ocean Color Radiometry: A Tutorial and Documentation of the Algorithms Used by the NASA Ocean Biology Processing Group. Sequoia Scientific, Inc. Download pdf
Moore , K. D., K. J. Voss, and H. R. Gordon, 2000. Spectral reflectance of whitecaps: Their contribution to water-leaving radiance. J. Geophys. Res. 105, 6493-6499.
M.J. Montes, B.-C. Gao, and C. O. Davis, 2001. A new algorithm for atmospheric correction of hyperspectral remote sensing data. Proc. SPIE 4383, 23-30.
M.J. Montes and B.-C. Gao, 2004, NRL Atmospheric Correction Algorithms for Oceans: TAFKAA Users’ Guide. 39 pages. Download pdf
Morel, A. and A. Bricaud, 1981. Theoretical results concerning light-absorption in a discrete medium, and application to specific absorption of phytoplankton. Deep-Sea Res., Part A 28(11), 1375-1393.
Morel, A. and A. Bricaud, 1986. Inherent optical properties of algal cells including picoplankton theoretical and experimental results. Can. Bull. Fish. Aquat. Sci. 214, 521-560.
Morel, A. and B. Gentili, 1991. Diffuse reflectance of oceanic waters: its dependance on sun angle as influenced by molecular scattering contribution. Applied Opt. 30(30), 4427-4438.
Morel, A. and B. Gentili, 1993. Diffuse reflectance of oceanic waters: II: Bidirectional aspects. Applied Opt. 32(33), 6864-6879.
Morel, A. and B. Gentili, 1996. Diffuse reflectance of oceanic waters: III: Implication of bidirectionality for the remote-sensing problem. Applied Opt. 35(24), 4850-4862.
Morel, A. and S. Maritorena, 2001. Bio-optical properties of oceanic waters: A reappraisal. J. Geophys. Res. 106(C4), 7163-7180.
Morel, A. and L. Prieur, 1977. Analysis of variations in ocean color. Limnol. Oceanogr., 22(4), 709-722.
Morel, A. and R.C. Smith, 1974. Relation between total quanta and total energy for aquatic photosysthesis. Limnol. Oceanogr. 19(4), 591.
Morel, A. and R.C. Smith, 1982. Terminology and units in optical oceanography. Marine Geodesy 5(4), 335-349.
Morel, A., D. Antoine, and B. Gentili, 2002. Bidirectional reflectance of oceanic waters: accounting for Raman emission and varying particle scattering phase function. Appl. Optics 41(30), 6289-6306.
Morrison, J. R., 2003. In situ determination of the quantum yield of phytoplankton chlorophyll a fluorescence: A simple algorithm, observations, and a model. Limnol. Oceanogr. 48(2), 618-633.
Morrison, J. R. and N. B. Nelson, 2004. Seasonal cycle of phytoplankton UV absorption and the Bermuda Atlantic Time-series Study (BATS) site. Limnol. Oceanogr. 49(1), 215-224.
Mulhearn, P.J., 1981. Distribution of microbubbles in coastal waters. J. Geophys. Res. 86, 6429-6434.
Nechad, B., K.G. Ruddick, and Y. Park, 2010. Calibrationand validation of a generic multisensory algorithm for mapping of total suspended matter in turbid waters. Remote Sensing of Environment, 114, 854-866.
Nelson, N. B. and D. A. Siegel, 2002. Chromophoric DOM in the open ocean. In: C. A. Carlson (ed.), Biogeochemistry of Marine Dissolved Organic Matter., Academic Press, 547-578.
Nelson, N.B. and P.G. Coble, 2009. Optical analysis of chromophoric dissolved organic matter. Chapter 5 in: Practical Guidelines for the Analysis of Seawater, O. Wurl [ed], CRC Press.
Neville, R.A. and J.F.R. Gower, 1977. Passive remote-sensing of phytoplankton via chlorophyll-alpha fluoresence. J. Geophys. Res., C: Oceans Atmos. 82(24), 3487-3493.
Nicodemus, F.E., J.C. Richmond, J.J. Hsia, I.W. Ginsburg, and T. Limperis, 1977. Geometrical Considerations and Nomenclature for Reflectance, NBS Monograph 160, National Bureau of Standards.
National Research Council, 2011. Assessing the Requirements for Sustained Ocean Color Research and Operations. National Academies Press.
Press, W. H., S. A. Teukolsky, W. T. Vetterling, and B. P. Flannery, 1992. Numerical Recipes in Fortran: The Art of Scientific Computing, Second Edition. Cambridge Univ. Press, 963 pages.
O’Hern, T.J., 1987. Cavitation Inception Scale Effects I. Nuclei Distribution in Natural Waters II. Cavitation Inception in a Turbulent Shear Flow. Ph. D. thesis, p. 304, Pasadena, California: California Institute of Technology.
O’Hern, T.J., L. d’Agostino, and A.J. Acosta, 1988. Comparison of holographic and Coulter counter measurement of cavitation nuclei in the ocean. J. Fluids Eng. 110, 200-207.
O’Reilly, J.E., S. Maritorena, B.G. Mitchell, D.A. Siegel, K.L. Carder, S.A. Garver, M. Kahru, and C. McClain, 1998. Ocean chlorophyll algorithms for SeaWiFS. J. Geophys. Res. 103(C11), 24937-24953.
Ostrovska, M., 2012. Model of the dependence of the sun-induced chlorophyll a fluorescence quantum yield on the environmental factors in the sea. Optics Express 20(21), 23301-23317.
Patt, F. S., R. A. Barnes, R. E. Eplee, Jr., B. A. Franz, G. C. Feldman, S. W. Bailey, J. Gales, J. Werdell, M. Wang, R. Frouin, R. P. Stumpf, R. A. Arnone, R. W. Gould, Jr., P. M. Martinolich, V. Ransibrahmanakul, J. E. O’Reilly, and J. A. Yoder, 2003. Volume 22, Algorithm Updates for the Fourth SeaWiFS Data Reprocessing, SeaWiFS Postlaunch Technical Report Series, S. B. Hooker and E. R. Firestone [editors], NASA, 74 pages.
Petzold, T.J., 1972. Volume scattering functions for selected ocean waters. Scripts Inst. Oceanogr. Report SIO 72-78. Download pdf
Petzold, T.J., 1977. Volume scattering functions for selected ocean waters. Chapter 12 in Light in the Sea, J.E. Tyler [ed], Dowden, Hutchinson & Ross.
Phelps, A.D. and T.G. Leighton, 1998. Oceanic bubble population measurements using a buoy-deployed combination frequency technique. IEEE J. Oceanic Eng. 23, 400-410.
Phelps, A.D., D.G. Ramble, and T.G. Leighton, 1997. The use of a combination frequency technique to measure the surf zone bubble population. J. Acoust. Soc. Am. 101, 1981-1989.
Pierson, W. J. and L. Moskowitz, 1964. A proposed spectral form for fully developed wind seas based on the similarity theory of S. A. Kitaigorodskii. J. Geophys. Res., 69, 5181-5190.
Piskozub, J., D. Stramski, E. Terrill, and W.K. Melville, 2009. Small-scale effects of underwater bubble clouds on ocean reflectance: 3-D modeling results. Opt. Express 17, 11747-11752.
Pitarch, J. 2020. A review of Secchis contribution to marine optics and the foundation of Secchi disk science. Oceanography 33(3), DOI 10.5670/oceanog.2020.301.
https://doi.org/10.5670/oceanog.2020.301.
Pope, R.M. and E.S. Fry, 1997. Absorption spectrum (380-700 nm) of pure water. II. Integrating cavity measurements. Appl. Optics 36(33), 8710-8723.
Pozdnyakov D.V. and H. Grassl, 2003. Colour of inland and coastal waters: A methodology for its interpretation, Chichester: Springer-Praxis.
Preisendorfer, R.W., 1965. Radiative Transfer Theory on Discrete Spaces. Pergamon. 462 pages.
Preisendorfer, R.W., 1976. Hydrologic Optics, in 6 volumes: Vol. 1: Introduction, 218 pp; Vol. 2: Foundations, 400 pp; Vol. 3: Solutions, 246 pp; Vol. 4: Imbeddings, 207 pp; Vol. 5: Properties, 296 pp; Vol. 6: Surfaces. NOAA Pacific Mar. Environ. Lab., Seattle, WA. (Out of print, but available on CD from Curtis Mobley)
Preisendorder, R. W., 1986. Secchi disk science: Visual optics of natural waters. Limnol. Oceanogr. 31(5), 909-926.
Preisendorder, R. W., 1988. Principal Component Analysis in Meteorology and Oceanography. Elsevier. 425 pages.
Preisendorfer and Mobley (1985)
Preisendorder, R. W. and C. D. Mobley,1985. Unpolarized Irradiance Reflectances and Glitter Patterns of Random Capillary Wave on Lakes and Sea, by Monte Carlo Simulation. NOAA Tech. Memo. ERL-PMEL-63. NTIS PB86-123577.
Preisendorfer and Mobley (1986)
Preisendorder, R. W. and C. D. Mobley,1986. Albedos and glitter patterns of a wind-roughened sea surface. J. Phys. Oceanogr. 16(7), 1293-1316. Reply in J. Phys. Oceanogr. 17(4), 551.
Press, W. H., S. A. Teukolsky, W. T. Vetterling, and B. P. Flannery, 1992. Numerical Recipes in Fortran: The Art of Scientific Computing, Second Edition. Cambridge Univ. Press, 963 pages.
Prezelin, B.B. and R.S. Alberte, 1978. Photosynthetic characteristics and organization of chlorophyll in marine dinoflagellates. Proc. Natl. Acad. Sci. U. S. A. 75(4), 1801-1804.
Prieur, L. and A. Morel, 1971. Etude theorique du regime asymptotique: relations entre caracteristiques optiques et coefficient d’extinction relatif a la penetration de la lumiere du jour. Cah. Oceanogr. 23, 35-47.
Prieur and Sathyendranath (1981)
Prieur, L. and S. Sathyendranath, 1981. An optical classification of coastal and oceanic waters based on the specific spectral absorption of phytoplankton pigments, dissolved organic matter, and other particulate materials. Limnol. Oceanogr. 26(4):671-689.
Proakis, J. G. and D. G. Manolakis, 1996. Digital Signal Processing: Principles, Algorithms, and Applications. Third Edition. Prentice Hall.
Quan, X. and E.S. Fry, 1995. Empirical equation for the index of refraction of seawater. Appl. Opt. 34, 3477-3480.
Quirantes, A. and S. Bernard, 2004. Light scattering by marine algae: Two-layer spherical and nonspherical models. J. Quant. Spectrosc. Radiat. Transfer 89, 311-321.
Quirantes, A. and S. Bernard, 2006. Light-scattering methods for modelling algal particles as a collection of coated and/or nonspherical particles. J. Quant. Spectrosc. Radiat. Transfer 100, 315-324.
Rainville, E.D., 1964. Elementary Differential Equations, Third Edition, Macmillan.
Reynolds, R. A., D. Stramski, V. M. Wright, and S. B. Woźniak, 2010. Measurements and characterization of particle size distributions in coastal waters. J. Geophys. Res. 115 (C08024), doi:10.1029/2009JC005930
Richards, J. A. and X. Jia, 1996. Remote Sensing Digital Image Analysis: An Introduction. 4th Edition. Springer 439 pages.
Roesler, C.S. and M.J. Perry, 1995. In situ phytoplankton absorption, fluorescence emission, and particulate backscattering spectra determined from reflectance. J. Geophys. Res. 100(C7), 13279-13294.
Roesler, C. S., M. J. Perry, and K. L. Carder, 1989. Modeling in situ phytoplankton absorption from total absorption spectra in productive inland marine waters. Limnol. Oceanogr. 34(8), 1510-1523.
Roettgers, R., D. McKee, and C. Utschig, 2014. Temperature and salinity correction coefficients for light absorption by water in the visible to infrared spectral region. Opt. Express 22(21), 25093-25108.
Roychoudhuri, C., A.F. Kracklauer, and K. Creath, 2008. The Nature of Light: What is a Photon?, CRC Press.
Runyan, H., R. A. Reynolds, and D. Stramski, 2020. Evaluation of particle size distribution metrics to estimate the relative contributions of different size fractions based on measurements in Arctic waters. J. Geophys. Res. Oceans 125 e2020JC016218. DOI:10.1029/2020JC016218
Sabbah, S. and N. Shashar, 2006. Underwater light polarization and radiance fluctuations induced by surface waves. Appl. Optics 45(19), 4726-4739.
Sakurai, J. J., 1967. Advanced Quantum Mechanics. Addison Wesley.
San, B. T. and M. L. Suzen, 2010. Evaluation of different atmospheric correction algorithms for EO-1 Hyperion imagery. Internat. Archives Photogrammetry, Rem. Sens. Spatial Info. Sci., XXXVIII (Part 8), Kyoto, Japan.
Sanchez, R. and N. McCormick, 2002. Analytic beam spread function for ocean optics applications. Appl. Optics 41(30), 6276-6288.
Santabarbara, S., W. Remelli, A. A. Petrova, and A. P. Casazza, 2020. Influence of the wavelength of excitation and fluorescence emission detection on the estimation of fluorescence-based physiological parameters in different classes of photosynthetic organisms. In Fluorescence Methods for Investigation of Living Cells and Microorganisms, N. Grigoryeva, IntechOpen, DOI: 10.5772/intechopen.93230
Schott, J. R., 1999. Fundamentals of Polarimetric Remote Sensing. SPIE Tutorial Text Vol. TT81, 244 pages.
Schuster, A., 1897. On lunar and solar periodicities of earthquakes, ”Proc. Royal Soc. London, 61.369-377, 455-465.
Schuster, A., 1898. On the investigation of hidden periodicities with application to a supposed 26 day period of meteorological phenomena, in Terrestrial Magnetism, III, J. A. Fleming, Editor, 13-41.
Schuster, A., 1905. Radiation through a foggy atmosphere. The Astrophysical Journal, XXI, No. X, 1-22.
Schwarz, J. N., P. Kowalczuk, S. Kaczmarek, G. F. Cota, B. G. Mitchell, M. Kahru, F. P. Chavez, A. Cunningha, D. McKee, P. Gege, M. Kishino, D. A. Phinney, and R. Raine, 2002. Two models for absorption by coloured dissolved organic matter (CDOM). Oceanologia 44(2), 209-241.
Shen, Y.T., S. Gowing, and B. Eckstein, 1986. Cavitation Susceptibility Measurements of Ocean Lake and Laboratory Waters, p. 47. David Taylor Naval Ship Research and Development Center.
Segelstein, D., 1981. The Complex Refractive Index of Water, M.S. Thesis, University of Missouri, Kansas City. 170 pages.
Shettle, E. P. and R. W. Fenn, 1979. Models for the aerosols of the lower atmosphere and the effects of humidity variation on their optical properties. Air Force Geophys. Lab., Hanscom Air Force Base, MA. Environ. Res. Paper 676, AFGL-TR-79-0214.
Shifrin, K.S., 1988. Physical Optics of Ocean Water. American Institute of Physics.
Shimizu, K. and E. L. Crow, 1988. History, Genesis, and Properties, in Lognormal Distributions: Theory and Applications, E. L. Crow and K. Shimizu [editors], CRC Press, 389 pages.
Siegel, D.A., M. Wang, S. Maritorena, and W. Robinson, 2000. Atmospheric correction of satellite ocean color imagery: the black pixel assumption. Appl. Optics 39(21), 3582-3591.
Slade, W.H., Y. C. Agrawal, and O. A. Mikkelsen, 2013. Comparison of measured and theoretical scattering and polarization properties of narrow size range irregular sediment particles. In IEEE Oceans-San Diego, 1-6.
Smith, W.J., 1985. Modern Optical Engineering: The Design of Optical Systems, Second Edition., McGraw-Hill.
Smith, R.C. and K. Baker, 1978. The bio-optical state of ocean waters and remote sensing. Limnol. Oceanogr. 23(2), 247.
Smoluchowski, M. v., 1908. Molekular-kinetische Theorie der Opaleszenz von Gasen im kritischen Zustande, sowie einiger verwandter Erscheinungen. Ann. Physik 25, 205-226.
Soffer, B.H. and D.K. Lynch, 1999. Some paradoxes, errors, and resolutions concerning the spectral optimization of human vision. Am. J. Phys. 67(11), 946-953.
Solonenko, M. G. and C. D. Mobley, 2015. Inherent optical properties of Jerlov water types. Appl. Optics 54(17), 5392-5401.
Sosik, H.M., 2008. Characterizing seawater constituents from optical properties. In M. Babin, C.S. Roesler and J.J. Cullen [eds.], Real-time coastal observing systems for ecosystem dynamics and harmful algal blooms, UNESCO.
Stavin, R. H. and A. D. Weidemann, 1988. Optical modeling of clear ocean light fields: Raman scattering effects. Appl. Optics 27, 4002-4010.
Stedmon, C.A., C.L. Osburn, and T. Kragh, 2010. Tracing water mass mixing in the Baltic North Sea transition zone using the optical properties of coloured dissolved organic matter. Estuarine, Coastal and Shelf Sci., 87, 156-162.
Steel, W. H., 1974. Luminosity, throughput, or etendue? Appl. Optics 13(4), 704-705.
Stout, B. and N. Bonod, 2020. Gustav Mie: the man, the theory. Photoniques 101, 22-26. DOI 10.1051/photon/202010122
Stramska, M. and T. Petelski, 2003. Observations of oceanic whitecaps in the north polar waters of the Atlantic. J. Geophys. Res 108(C3), DOI 10.1029/2002JC001321
Stramski, D. and D. A. Kiefer, 1991. Light scattering by microorganisms in the open ocean. Prog. Oceanogr. 28, 343-383.
Stramski, D. and J. Tegowski, 2001. Effects of intermittent entrainment of air bubbles by breaking wind waves on ocean reflectance and underwater light field. J. Geophys. Res. 106, 31,345-331,360.
Stramski, D. and S.B. Wozniak, 2005. On the role of colloidal particles in light scattering in the ocean. Limnol. Oceanogr. 50, 1581-1591.
Stramski, D., A. Bricaud, and A. Morel, 2001. Modeling the inherent optical properties of the ocean based on the detailed composition of the planktonic community. Appl. Opt. 40(18), 2929-2945.
Stramski, D., E. Boss, D. Bogucki, and K. J. Voss, 2004. The role of seawater constituents in light backscattering in the ocean. Prog. Oceanogr. 61, 27-56.
Stramski, D., S. Woźinak, and P. J. Flatau, 2004. Optical properties of Asian mineral dust suspended in seawater. Limnol. Oceanogr. 49(3), 749-755.
Stramski, D., M. Babin, and S. Woźinak, 2007. Variations in the optical properties of terrigenous mineral-rich particulate matter suspended in seawater. Limnol. Oceanogr. 52(6), 2418-2433.
Stramski, D., R. A. Reynolds, S. Kaczmarek, J. Uitz, and G. Zheng. 2015. Correction of pathlength amplification in the filter-pad technique for measurements of particulate absorption coefficient in the visible spectral region. Applied Optics 54, 6763-6782. DOI 10.1364/AO.54.006763
Stramski, D., L. Li, and R. A. Reynolds, 2019. Model for separating the contributions of non-algal particles and colored dissolved organic matter to light absorption by seawater. Appl. Optics 58(14), 3790-3806.
Strutt, J. W. (Lord Rayleigh),1871. XV. On the light from the sky, its polarization and colour. The London, Edinburgh, and Dublin Philosophical Magazine and Journal of Science 41 (271): 107-120. doi:10.1080/14786447108640452
Stumpf, R. and J.R. Pennock, 1989. Calibration of a general optical equation for remote sensing of suspended sediments in a moderately turbid estuary. J. Geophys. Res., 94, 14363-14371.
Su, M.Y. and J. Cartmil, 1994. Low-frequency underwater sound speed variations due to oceanic bubbles, p. 351-365. In M.J. Buckingham and J.R. Potter [eds.], Sea surface sound. World Scientific.
Su, M.Y., S.C. Ling, and J. Cartmill, 1988. Optical microbubble measurements in the North Sea, p. 211-223. In B.R. Kerman [ed.], Sea surface sound. Kluwer Academic Publishers.
Subramaniam, A., C.W. Brown, R.R. Hood, E.J. Carpenter, and D.G. Capone, 2002. Detecting Trichodesmium blooms in SeaWiFS imagery. Deep-Sea Res., Part II 49(1-3), 107-121.
Sugihara, S. M. Kishino, and N. Okami, 1984. Contribution of Raman scattering up upward irradiance in the sea. J. Oceanogr. Soc. Japan 40, 397-404.
Sullivan and Twardowski (2009)
Sullivan, J.M. and M.S. Twardowski, 2009. Angular shape of the oceanic particulate volume scattering function in the backward direction. Appl. Opt. 48(35), 6811-6819.
Sullivan, J.M., M.S. Twardowski, P.L. Donaghay, and S.A. Freeman, 2005. Use of optical scattering to discriminate particle types in coastal waters.” Appl. Opt. 44(9), 1667-1680.
Sullivan, J.M., M.S. Twardowski, J.R. Zaneveld, C. Moore, A. Barnard, P.L. Donaghay, and B. Rhoades, 2006. The hyper-spectral temperature and salinity dependent absorption of pure water, salt water and heavy salt water (D 2 O) in the visible and near-IR wavelengths (400 - 750 nm). Appl. Opt. 45(21), 5294-5309.
Sun, D., Y. Li, Q. Wang, H. Lv, C. Le, C. Huang, and S. Gong, 2010. Partitioning particulate scattering and absorption into contributions of phytoplankton and non-algal particles in winter in Lake Taihu (China). Hydrobiologia, 644, 337-349. DOI 10.1007/s10750-010-0198-7
Takano, Y. and K.-N. Liou, 1989. Solar radiative transfer in cirrus clouds. Part I: Single-scattering and optical properties of hexagonal ice crystals. J. Atmos. Sci. 46(1), 3-19.
Tan, H., R. Doerffer, T. Oishi, and A. Tanaka, 2013. A new approach to measure the volume scattering function. Optics Express 21(16), 18697-18711. DOI 10.1364/OE.21.018697
Tan, S., J. Zhu, L. Tsang, and S. V. Nghiem, 2016. Numerical simulation of Maxwell’s equation in 3D (NMM3D) applied to active and passive remote sensing of terrestrial snow and snow on sea ice. Prog. Electro. Res. Symp (PIERS), DOI 10.1109/PIERS.2016.7735538
Terrill, E.J. and W.K. Melville, 2000. A broadband acoustic technique for measuring bubble size distributions: laboratory and shallow water measurements. J. Atmos. Oceanic Technol. 17, 220-239.
Terrill, E.J., W.K. Melville, and D. Stramski, 2001. Bubble entrainment by breaking waves and their influence on optical scattering in the upper ocean. J. Geophys. Res. 106, 16,815-816,823.
Tessendorf, J., 2004. Simulating Ocean Water. Tech. Rept., SIGGRAPH Course Notes, 2004. Download pdf
Timofeeva, U.A. and F.I. Gorobetz, 1967. The relationship between the coefficient of extinction of collimated and diffuse fluxes of light. Izv. Akad. Nauk, USSR, Series Geofizik, 3, 291-296.
Thorpe, S.A., 1982. On the clouds of bubbles formed by breaking wind waves in deep water, and their role in air-sea transfer. Philos. Trans. R. Soc. London Series A, 304, 155-210.
Thorpe, S.A. 1986. Measurements with an automatically recording inverted echo sounder; ARIES and the bubble clouds. J. Phys. Oceanogr. 16, 1462-1478.
Thorpe, S.A. and A.J. Hall, 1983. The characteristics of breaking waves, bubble clouds, and near-surface currents observed using side-scan sonar. Cont. Shelf Res. 1, 353-384.
Thorpe, S.A. and P.N. Humphries, 1980. Bubbles and breaking waves. Nature 283, 463-465.
Toole, D.A., D.A. Siegel, D.W. Menzies, J.J. Neumann, and R.C. Smith, 2000. Remote-sensing reflectance determinations in the coastal ocean environment: impact of instrumental characteristics and environmental variability. Appl. Optics 39(3), 456-469.
Tomlinson, M.C., T.T. Wynne, and R.P. Stumpf, 2009. An evaluation of remote sensing techniques for enhanced detection of the toxic dinoflagellate, Karenia brevis. Remote Sens. Env. 113(3), 598-609.
Thuillier, G., M. Hersé, D. Labs, T. Foujols, W. Peetermans, D. Gillotay, P. C. Simon, and H. Mandel, 2003. The solar spectral irradiance from 200 to 2400 nm as measured by the SOLSPEC spectrometer from the ATLAS and EURECA missions. Solar Physics 214, 1-22.
Tonizzo, A., M. Twardowski, S. McLean, K. Voss, M. Lewis, and C. Trees. Closure and uncertainty assessment for ocean color reflectance using measured volume scattering functions and reflective tube absorption coefficients with novel correction for scattering. Appl. Optics 56(1), 130-146. DOI 10.1364/AO.56.000130
Twardowski, M.S., E. Boss, J.B. Macdonald, W.S. Pegau, A.H. Barnard, and J.R.V. Zaneveld, 2001. A model for estimating bulk refractive index from the optical backscattering ratio and the implications for understanding particle composition in case I and case II waters. J. Geophys. Res., [Oceans] 106(C7), 14129-14142.
Twardowski, M.S., E. Boss, J.M. Sullivan, and P.L. Donaghay, 2004. Modeling the spectral shape of absorption by chromophoric dissolved organic matter (CDOM). Mar. Chem. 89:69-88.
Twardowski, M.S., X. Zhang, S. Vagle, J. Sullivan, S. Freeman, H. Czerski, Y. You, L. Bi, and G. Kattawar, 2012. The optical volume scattering function in a surf zone inverted to derive sediment and bubble particle subpopulations. J. Geophys. Res. 117(C00H17), doi:10.1029/2011JC007347
Tyler, J.E., 1960. Radiance distribution as a function of depth in an underwater environment. Bull. Scripps Inst. Ocean. 7(5), 363-412. Download pdf
Tyler, J.E. and R. C. Smith, 1970. Measurements of Spectral Irradiance Underwater. Gordon and Breach, New York.103 pages.
Tzortziou, M., J.R. Herman, C.L. Gallegos, P.J. Neale, A. Subramaniam, L.W. Harding Jr., and Z. Ahmad, 2006. Bio-optics of the Chesapeake Bay from measurements and radiative transfer closure. Estuarine, Coastal and Shelf Sci. 68, 348-362.
Ulloa, O., S. Sathyendranath, and T. Platt, 1994. Effect of the particle-size distribution on the backscattering ratio in seawater. Appl. Optics 33(30), 7070-7077.
Vagle, S. and D.M. Farmer, 1992. The measurement of bubble-size distributions by acoustical backscatter. J. Atmos. Oceanic Technol. 9, 630-644.
Vagle, S. and D.M. Farmer, 1998. A comparison of four methods for bubble size and void fraction measurements. IEEE J. Oceanic Eng. 23, 211-222.
Vaillancourt, R.D., C.W. Brown, R.R.L. Guillard, and W.M. Balch, 2004. Light backscattering properties of marine phytoplankton: relationships to cell size, chemical composition and taxonomy. J. Plankton Res. 26(2), 191-212.
van de Hulst, H.C., 1957. Light Scattering by Small Particles, John Wiley & Sons, New York.
van de Hulst, H.C., 1980. Multiple Light Scattering: Tables, Formulas, and Applications, Vol. 1, pages 1-299; Vol. 2, 300-739, Academic Press.
van de Hulst, H.C., 1981. Light Scattering by Small Particles, Dover. (Reprint of the 1957 edition)
Vasilkov, A. P., J. R. Herman, Z. Ahmad, M. Kahru, and B. G. Mitchell, 2005. Assessment of the ultraviolet radiation field in ocean waters from space-based measurements and full radiative-transfer calculations. Appl. Optics 44(14), 2863-2869.
Vodacek, A., M.D. DeGrandpre, E.T. Peltzer, R.K. Nelson, and N.V. Blough, 1997. Seasonal variation of CDOM and DOC in the Middle Atlantic Bight: Terrestrial inputs and photooxidation. Limnol. Oceanogr. 42, 674-686.
Volten, H., J.F. de Haan, J.W. Hoovenier, R. Schreurs, and W. Vassen, 1998. Laboratory measurements of angular distributions of light scattered by phytoplankton and silt. Limnol. Oceanogr. 43, 1180-1197.
Voss, K.J., 1989. Use of the radiance distribution to measure the optical absorption coefficient in the ocean. Limnol. Oceanogr. 34(8), 1614-1622.
Voss, K.J. and A. L. Chapin, 1990. Measurement of the point spread function in the ocean. Appl. Optics 29(25), 3638-3642.
Voss, K.J., 1991. Simple empirical model fo the oceanic point spread function. Appl. Optics 30(18), 2647-2651.
Voss, K.J., 1992. a spectral model of the beam attenuation coefficient in the ocean and coastal waters. Limnol. Oceanogr. 37(3), 501-509.
Voss, K.J. and E.S. Fry, 1984. Measurement of the Mueller matrix for ocean water. Appl. Optics 23(23), 4427-4439.
Voss, K. J., A. Morel, and D. Antoine, 2007. Detailed validation of the bidirectional effect in various Case 1 waters for application to ocean color imagery, Biogeosciences 4, 781-789.
Waaland, J.R. and D. Branton, 1969. Gas Vacuole Development in a Blue-Green Alga. Science 163, 1339-1341.
Wang, M., 2002. The Rayleigh lookup tables for the SeaWiFS data processing: accounting for the effects of ocean surface roughness. Internat. J. Remote Sensing 23(13), 2693-2702.
Wang, M., 2005. A refinement for the Rayleigh radiance computation with variation of the atmospheric pressure. Internat. J. Remote Sensing 26(24), 5651-5653.
Wang, M. and S. W. Bailey, 2001. Correction of sun glint contamination of the SeaWiFS ocean and atmosphere products. Appl. Optics 40(27), 4790-4798.
Walker, R.E., 1994. Marine Light Field Statistics, John Wiley & Sons, Inc.
Walrafen, G. E., 1967. Raman spectral studies of the effects of temperature on water structure. J. Chem. Phys. 47(1), 118-121.
Walsh, A.L. and P.J. Mulhearn, 1987. Photographic measurements of bubble populations from breaking wind waves at sea. J. Geophys. Res. 92, 14553-14565.
Werdell, P. J., 2015. Ocean color satellite atmospheric correction. Lecture at the 2015 Univ. of Maine Summer Class in Optical Oceanography and Remote Sensing. Video of this lecture is available online
Werdell, P. J., S. W. Bailey, B. A. Franz, A. Morel, and C. R. McClain, 2007. On-orbit vicarious calibration of ocean color sensors using an ocean surface reflectance model. Appl. Optics 46(23), 5649-5666.
Werdell, P. J., B. A. Franz, J. T. Lefler, W. D. Robinson, and E. Boss, 2013. Retrieving marine inherent optical properties from satellites using tempreature and salinity-dependent backscattering by seawater. Optics Express, 21, 32611-32622.
Wernand, M.R., 2011. Poisedon’s Paintbox: Historical Archives of Ocean Color in Global-Change Perspective. Ph.D. dissertation, Univ. of Utrecht, 204 pages.
Witkowski, K., T. Krol, A. Zielinski, and E. Kuten, 1998. A light-scattering matrix for unicellular marine phytoplankton. Limnol. Oceanogr. 43, 859-869
Wolfe, W.L., 1998. Introduction to Radiometry, SPIE Optical Engineering Press, vol. TT29.
Wyatt, P.J. and C. Jackson, 1989. Discrimination of phytoplankton via light-scattering properties. Limnol. Oceanogr. 34, 96-112.
Xu, Z. and D. K. P. Yue, 2015. Analytical solution of beam spread function for ocean light radiative transfer. Optics Express, 23(14), 17966-17978.
Yacobi, Y.Z., J.J. Alberts, M. Takacs, and M. McElvaine, 2003. Absorption spectroscopy of colored dissolved organic carbon in Georgia (USA) rivers: the impact of molecular size distribution. J. Limnol. 62, 41-46.
Yan, B., B. Chen, B., and K. Stamnes, 2002. Role of oceanic air bubbles in atmospheric correction of ocean color imagery. Appl. Opt. 41, 2202-2212.
Yang, H. and H. R. Gordon, 1997. Remote sensing of ocean color: Assessment of the water-leaving radiance bidirectional effects on the atmospheric diffuse transmittance. Appl. Optics 36(30), 7887-7897.
You, Y., A. Tonizzo, A. A. Gilerson, M. E. Cummings, P. Brady, J. M. Sullivan, M. S. Twardowski, H. M. Diersen, S. A. Ahmad, and G. W. Kattawar, 2011. Measurements and simulations of polarization states of underwater light in clear oceanic waters. Appl. Optics 50(24), 4873-4893.
Yount, D.E., 1979. Skins of varying permeability: A stablization mechanism for gas cavitation nuclei. J. Acoust. Soc. Am. 65, 1429-1439.
Zaneveld, J.R.V., J.C. Kitchen, and C.C. Moore, 1994. The scattering error correction of reflecting-tube absorption meters. SPIE Vol. 2258, Ocean Optics XII J.S. Jaffe [ed.], 44-55.
Zaneveld, J.R.V. and W. S. Pegau, 2003. Robust underwater visibility parameter. Optics Express 11(23) 2997-3009.
Zhai, P.-W., G. W. Kattawar, and Y. Hu, 2012. Comment on the transmission matrix for a dielectric interface. J. Quant. Spectros. Rad. Trans., 113, 1981-1984.
Zhang, X. and L. Hu, 2009. Estimating scattering of pure water from density fluctuation of the refractive index. Opt. Express 17, 1671-1678.
Zhang, X., M.R. Lewis, and B.D. Johnson, 1998. Influence of bubbles on scattering of light in the ocean. Appl. Opt. 37, 6525-6536.
Zhang, X., M.R. Lewis, M. Lee, B.D. Johnson, and G. Korotaev, 2002. Volume scattering function of natural bubble populations. Limnol. Oceanogr. 47, 1273-1282.
Zhang, H., K.J. Voss, R. P. Reid, and E. M. Louchard, 2003. Bidirectional reflectance measurements of sediments in the vicinity of Lee Stocking Island, Bahamas. Limmol. Oceanogr. 41(1, part 2), 380-389.
Zhang, X., M. Lewis, W. P. Bissett, B. Johnson, and D. Kohler, 2004. Optical influence of ship wakes. Appl. Opt. 43, 3122-3132.
Zhang, X., H. Lianbo, and M-X. He, 2009. Scattering by pure seawater: Effect of salinity. Opt. Express 17, 5698-5710.
Zhang, X., D. Stramski, R. A. Reynolds, and E. R. Blocker, 2019. Light scattering by pure water and seawater: the depolarization ratio and its variation with salinity. Appl. Opt. 58(4), 991-1004.
Zoloratev, V. M. and A. V. Demin, 1977. Optical constants of water over a broad range of wavelengths, 0.1 Å–1 m. Optics Spectroscopy (USSR) 43(2), 157-161.